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Documentation

  • Requesting An Account
  • Cluster Specifications
    • Node Features (Constraints)
      • NVLink and NVSwitch
    • Node List
    • Partition List
      • Gypsum
    • Storage
  • Frequently Asked Questions
  • Connecting to Unity
    • SSH
    • Unity OnDemand
    • Connecting to Desktop VS Code
  • Managing Files
    • Command Line Interface (CLI)
    • Disk Quotas
    • FileZilla
    • Globus
    • Scratch: HPC Workspace
    • Unity OnDemand File Browser
  • Submitting Jobs
    • Batch Jobs
      • Array Batch Jobs
      • Large Job Counts
      • Monitor a batch job
    • Interactive CLI Jobs
    • Unity OnDemand
    • Slurm cheat sheet
  • Software Management
    • Conda
    • Modules
      • Module Usage
      • Module Hierarchy
    • Unity OnDemand
      • JupyterLab OnDemand
  • Tools & Software
    • ColabFold
    • R
    • Unity GPUs
  • Datasets
    • AI and ML
      • Code Llama
      • Imagenet
      • Imagenet 1K
      • LAION
      • Llama2
      • mixtral
    • Bioinformatics
      • BFD/MGnify
      • Big Fantastic Database
      • checkm
      • ColabFoldDB
      • dfam
      • EggNOG
      • GTDB
      • Kraken2
      • MGnify
      • NCBI BLAST databases
      • NCBI RefSeq database
      • PDB70
      • PDB70 for ColabFold
      • Protein Data Bank
      • Protein Data Bank database in mmCIF format
      • Protein Data Bank database in SEQRES records
      • Tara Oceans 18S amplicon
      • Tara Oceans MATOU gene catalog
      • Tara Oceans MGT transcriptomes
      • Uniclust30
      • UniProtKB
      • UniRef100
      • UniRef100 BLAST database
      • UniRef30
      • UniRef90
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  5. Tara Oceans 18S amplicon

Tara Oceans 18S amplicon

Path:/datasets/bio/tara-oceans/18S_amplicon
URL:https://www.ebi.ac.uk/ena/browser/view/PRJEB6610
Downloaded:2014-06-24
Cite:de Vargas, C., Audic, S., Henry, N., Decelle, J., Mahé, F., Logares, R., Lara, E., Berney, C., Le Bescot, N., Probert, I., Carmichael, M., Poulain, J., Romac, S., Colin, S., Aury, J. M., Bittner, L., Chaffron, S., Dunthorn, M., Engelen, S., Flegontova, O., … Karsenti, E. (2015). Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean. Science (New York, N.Y.), 348(6237), 1261605. https://doi.org/10.1126/science.1261605
Bibtex:
@article{deVargas2015,title = {Eukaryotic plankton diversity in the sunlit ocean},volume = {348},ISSN = {1095-9203},url = {http://dx.doi.org/10.1126/science.1261605},DOI = {10.1126/science.1261605},number = {6237},journal = {Science},publisher = {American Association for the Advancement of Science (AAAS)},author = {de Vargas,  Colomban and Audic,  Stéphane and Henry,  Nicolas and Decelle,  Johan and Mahé,  Frédéric and Logares,  Ramiro and Lara,  Enrique and Berney,  Cédric and Le Bescot,  Noan and Probert,  Ian and Carmichael,  Margaux and Poulain,  Julie and Romac,  Sarah and Colin,  Sébastien and Aury,  Jean-Marc and Bittner,  Lucie and Chaffron,  Samuel and Dunthorn,  Micah and Engelen,  Stefan and Flegontova,  Olga and Guidi,  Lionel and Horák,  Aleš and Jaillon,  Olivier and Lima-Mendez,  Gipsi and Lukeš,  Julius and Malviya,  Shruti and Morard,  Raphael and Mulot,  Matthieu and Scalco,  Eleonora and Siano,  Raffaele and Vincent,  Flora and Zingone,  Adriana and Dimier,  Céline and Picheral,  Marc and Searson,  Sarah and Kandels-Lewis,  Stefanie and Acinas,  Silvia G. and Bork,  Peer and Bowler,  Chris and Gorsky,  Gabriel and Grimsley,  Nigel and Hingamp,  Pascal and Iudicone,  Daniele and Not,  Fabrice and Ogata,  Hiroyuki and Pesant,  Stephane and Raes,  Jeroen and Sieracki,  Michael E. and Speich,  Sabrina and Stemmann,  Lars and Sunagawa,  Shinichi and Weissenbach,  Jean and Wincker,  Patrick and Karsenti,  Eric and Boss,  Emmanuel and Follows,  Michael and Karp-Boss,  Lee and Krzic,  Uros and Reynaud,  Emmanuel G. and Sardet,  Christian and Sullivan,  Matthew B. and Velayoudon,  Didier},year = {2015},month = may}
Last modified: Monday, July 22, 2024 at 3:15 PM. See the commit on GitLab.
University of Massachusetts Amherst University of Massachusetts Amherst University of Rhode Island University of Rhode Island University of Massachusetts Dartmouth University of Massachusetts Dartmouth University of Massachusetts Lowell University of Massachusetts Lowell University of Massachusetts Boston University of Massachusetts Boston Mount Holyoke College Mount Holyoke College
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